Could you post what jetting you have and elevation.
A leakdown kit is cheap insurance and a compression test would help too. Mod quad tors delete. The red jumpers are not useful. Be sure to remove the tors brain box. The dent is 50/50. Some people pressurize the exhaust with air and use a torch to pop the dent out. Cause any real problem no Your air filter is 50/50. Yes a spring is missing. Btw go job posting pics. Most run a billet ovel shaped k&n with outters if water or mud is going to happen if you are dunes only maybe no box and or pods on carbs. Welcome to bhq. If you are in so cal show your quad to Herr jugs racing and Kevin can help you out with tuning and ect